Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., Hcp family type VI secretion system effector from Dickeya dianthicola ME23

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 12/161 (7%)

Query: 6   YISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVH 65
           Y+ IEG+ QGLI++G  + DS+G+ + +GHE+E+ V + ++         S +      +
Sbjct: 6   YLKIEGKNQGLISSGCGSYDSMGNKWQQGHENEIFVYELNN---------SAERIDNVAY 56

Query: 66  KPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHC 125
           +P +    ++K+ PLL +AL+  E L T    +YRTS  G  E +F+ KL +A + +I  
Sbjct: 57  QPVEIRKPIDKSTPLLLSALNENEYL-TCTFIFYRTSENGGIEQYFSIKLTDAKVKNIRM 115

Query: 126 EMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDW 166
             P       +++     +S +Y+ +  +H+ AGTS    W
Sbjct: 116 HYP--SSITHNEYQPEEFISFTYKNMLCEHIKAGTSAYCIW 154