Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., Hcp family type VI secretion system effector from Dickeya dianthicola ME23

 Score = 99.8 bits (247), Expect = 2e-26
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 12/166 (7%)

Query: 6   YISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVH 65
           Y+++EG  QGLI++G  T DSIG+ +  GHED++ V    H +T               H
Sbjct: 6   YLTLEGNQQGLISSGCSTFDSIGNRYQSGHEDQIQVLGLSHSIT---------RDDNIAH 56

Query: 66  KPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHC 125
            P + T  ++K+ PLL  +++S EKL T    +YRT+  G+ E F+  KL +A IVD+  
Sbjct: 57  HPIQLTKPIDKSSPLLGMSITSNEKL-TANFFFYRTNSAGQLEVFYELKLIDARIVDVSS 115

Query: 126 EMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPIE 171
             PH  +   ++      + L Y+ I W H  AGTSG   W    E
Sbjct: 116 SYPHSIN--NNETLPYEIIRLKYKSIEWSHKTAGTSGYSIWNDDYE 159