Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., Hcp family type VI secretion system effector from Dickeya dadantii 3937

 Score = 96.7 bits (239), Expect = 2e-25
 Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 12/161 (7%)

Query: 6   YISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVH 65
           Y+++EG  QGLI++G  T DSIG+ + +GHED++ V   +H +T               H
Sbjct: 6   YLTLEGNQQGLISSGCSTFDSIGNRYQKGHEDQIQVLGLNHTIT---------REENIAH 56

Query: 66  KPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHC 125
            P +    ++K+ PLL  +++S E L T    +YRT++ G+ E F+  KL +A IV++  
Sbjct: 57  HPIQLIKPIDKSSPLLGVSVTSNESL-TATFFFYRTNLAGQLEVFYELKLTDARIVEVSA 115

Query: 126 EMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDW 166
             PH  +   SD      + L Y  I W H  AGTSG   W
Sbjct: 116 TYPHSLN--DSDSLPYEVIMLRYNTIEWTHKTAGTSGYSIW 154