Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity from Escherichia coli BL21

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 6   YISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVH 65
           Y+++ G+ QG I+AG  T++S G+ +  GHEDE     F  +  +       Q  G    
Sbjct: 6   YLTVTGEQQGSISAGCGTSESTGNRWQSGHEDETFT--FSLLNNINNTGLGSQFHG---- 59

Query: 66  KPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHC 125
               F   ++K+ PL  N++++ E+L  +   +YR +  G+ E ++  +L  A +  IH 
Sbjct: 60  --ITFCKLIDKSTPLFINSINNNEQL-FIGFDFYRINRFGRWEKYYYIQLRGAFLSAIHH 116

Query: 126 EMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGS 163
           ++   Q            +++SY  I   H+ A T  S
Sbjct: 117 QIIENQ-------LDTEKITISYEFILCQHLIANTEFS 147