Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens GW456-L13

 Score =  224 bits (570), Expect = 1e-62
 Identities = 132/437 (30%), Positives = 236/437 (54%), Gaps = 15/437 (3%)

Query: 156 SAFSQMMTDYATEGSFAEL--MANGNVIFSDKHGVNLTPITRPINFAGQD--WQLIGYID 211
           S F + ++D       A +  +  G V ++         +  P      D  W L+  + 
Sbjct: 277 SKFGEKVSDILDSKQIANMANLKRGEVTYTVDKAQGRIELYLPFGIGQTDARWTLMLQLP 336

Query: 212 LTAIQANTDQLN-----------WKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVA 260
           L A+ A+  +L            + + +  LV A + ++    + H   +PL ++  ++ 
Sbjct: 337 LNAVMADLQKLQADLDAQRKSDTFGMAMVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLD 396

Query: 261 NLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQA 320
           +++QG GDLT+RL  +  DE+G I    N F+ KLQ M   V  S + +  +  H ++ A
Sbjct: 397 DIAQGEGDLTRRLTSDRADELGSIAKGFNTFLAKLQAMITQVVTSVQSVSDSSEHTADIA 456

Query: 321 RSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAV 380
                 +++   E +Q  TA++EM+A+A  +A++A  AA      ++ A +  Q V +  
Sbjct: 457 IRTNTGVHKQMAEIDQVATAVQEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTS 516

Query: 381 NSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGR 440
           NS+  L  ++      +  +++D++ IN++L  I  IAEQTNLLALNAAIEAARAGEQGR
Sbjct: 517 NSIGALAVEIGRAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGR 576

Query: 441 GFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMD 500
           GFAVVADEVR LA +TQ++T +I  M+  L+  T +VV+ M+ ++   +E+    +   +
Sbjct: 577 GFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQNRTDESVLHASKAAE 636

Query: 501 SLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNE 560
           +L  +T +V+ +N++NT IA++A EQ  V  ++++N+  I ++  ++   A + ++ S +
Sbjct: 637 ALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVANEVAGGADESSAASAD 696

Query: 561 LQNTSHALSDVVGRFRV 577
           L   +     ++ +FRV
Sbjct: 697 LTKLAEQQRRLINQFRV 713