Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  225 bits (574), Expect = 4e-63
 Identities = 125/392 (31%), Positives = 226/392 (57%), Gaps = 11/392 (2%)

Query: 197 INFAGQDWQLIGYIDLTAIQANTDQLN-----------WKITLALLVCASVIIVASVTML 245
           I  A   W L+  + L+A+ A++ +L            + +T+A L+ A + ++    + 
Sbjct: 321 IGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLVIWLVG 380

Query: 246 HVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADS 305
           H   +PL ++  ++ +++QG GDLT+RL  +  DE+G I N  N F+ KLQ M   V  S
Sbjct: 381 HGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSS 440

Query: 306 SKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERT 365
            +++  +  H ++ A      +++   E +Q  TA+ EM+A+A  +A++A  AA      
Sbjct: 441 VQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHA 500

Query: 366 NRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLA 425
           ++ A +  + V +   S+  L  ++      +  +++D++ IN++L  I  IAEQTNLLA
Sbjct: 501 DQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLA 560

Query: 426 LNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTR 485
           LNAAIEAARAGEQGRGFAVVADEVR LA +TQ++T +I  M+  L+  T +VV+ M+ ++
Sbjct: 561 LNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQ 620

Query: 486 IHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVR 545
              +E+ +      ++L  +T +V+ +N++NT IA++A EQ  V  ++++N+  I ++  
Sbjct: 621 SRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVAN 680

Query: 546 KLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           ++   A + ++ S +L   +     ++ +F+V
Sbjct: 681 EVAGGADESSAASADLTKLAEQQRRLINQFKV 712