Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  214 bits (544), Expect = 1e-59
 Identities = 134/430 (31%), Positives = 233/430 (54%), Gaps = 14/430 (3%)

Query: 161 MMTDYATEGS-FAELMANGNVIFSDK-HGVNLTPITRPINFAGQDWQLIGYIDLTAIQAN 218
           +M     EG    +L+A+ + +  ++ H +      +PI  A + W ++  +    + A+
Sbjct: 284 LMDTVGAEGKEIVQLLASDSPMIREQDHTIRAVYPVKPIADA-KSWGVVVTLPRNVMLAD 342

Query: 219 T-------DQLNWKITLALLVCASVIIVASVTMLHVSF----KPLSRLNTLVANLSQGNG 267
           T       D+     TL  L+  +   +  + ++ ++     +P++ +  ++ +++ G+G
Sbjct: 343 TLKLQDVLDKAQAAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDG 402

Query: 268 DLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTL 327
           DLTQRLA   KDE+G++ N  N F++KLQ     +  S  E        S  AR     +
Sbjct: 403 DLTQRLAYAKKDELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGM 462

Query: 328 NQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLV 387
               +E +Q  TA  EMSA+A  +A SA +AA      ++ A E    + ++   +  L 
Sbjct: 463 QVQFREIDQVATASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLA 522

Query: 388 NQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 447
            +VS     +  ++ +++QI SVL+VI +IAEQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 523 EEVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVAD 582

Query: 448 EVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTD 507
           EVR LA RTQ S  +I  ++  +++ T  VV  M S++   +  A + +    +L  ++D
Sbjct: 583 EVRNLAKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISD 642

Query: 508 SVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHA 567
           +V  ++++N  IA++A +Q  V  EV++N++AI+ +   L   A +  ++S++L   +  
Sbjct: 643 AVTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQ 702

Query: 568 LSDVVGRFRV 577
              ++ +FRV
Sbjct: 703 QMKLMDQFRV 712