Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  205 bits (522), Expect = 4e-57
 Identities = 118/407 (28%), Positives = 210/407 (51%), Gaps = 8/407 (1%)

Query: 171 FAELMANGNVIFSDKHGVNLTPITRPINFAGQDWQLIGYIDLTAIQANTDQLNWKITLAL 230
           F+E+ ANG       + V   PI         +W L   +D     A   +      +A 
Sbjct: 231 FSEVEANGK-----DNIVTFIPIK---GLPSVNWDLGISVDKDKSFAMLSEFRTSAVIAT 282

Query: 231 LVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINL 290
            +   +II     ++ +  +PL  +   + +++ G GDLT+RL +++ DE G + N+ N 
Sbjct: 283 FIAVVIIIALLGMLIRILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNR 342

Query: 291 FIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGS 350
           F+E++     +V+ +++ ++   + + + + S++   ++    T     AI ++ A+A  
Sbjct: 343 FVERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQE 402

Query: 351 IAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSV 410
           IA++A  A+         A++ +Q V   + ++N L + +S+ +  I  ++  T  I  +
Sbjct: 403 IARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQI 462

Query: 411 LQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATL 470
           L+VI +I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  Q+  M+  L
Sbjct: 463 LEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEEL 522

Query: 471 KTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVT 530
           +      V  M  ++ H  E+ +  N   + LN VT  + E++ +N  +AT+  EQ  V 
Sbjct: 523 QVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVV 582

Query: 531 HEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
             ++ ++  I  + ++   N         +L+  +  L  +VG FR+
Sbjct: 583 ESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFRI 629