Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  212 bits (539), Expect = 4e-59
 Identities = 125/376 (33%), Positives = 196/376 (52%)

Query: 201 GQDWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVA 260
           G  W+ IG I+   + A   ++ +   L + V   +  + +     V  KP+ +++T + 
Sbjct: 269 GLGWRYIGLIEHREVMAEATRMTYLTALIVGVLVLIFGLIAAAFSKVIVKPIGQVSTGLQ 328

Query: 261 NLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQA 320
           +++QG GDL   L V+ KDE  ++    N F+  ++Q+   +  +S  +  A    S  A
Sbjct: 329 SIAQGEGDLRHELQVQGKDETAELAGWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVA 388

Query: 321 RSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAV 380
            +      +  +  E   TA  EM A+A  +A+S   AA   E  +R   E KQ +    
Sbjct: 389 HNMNEAAGRQREAVELVSTAFNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEVTT 448

Query: 381 NSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGR 440
           ++VN L  +++  ++ +  +   ++ IN +L  I AIAEQTNLLALNAAIEAARAG+QGR
Sbjct: 449 DNVNRLGRRLTESSQAMVELEAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGR 508

Query: 441 GFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMD 500
           GFAVVADEVRALA RT  ST +I  +L TL+  T+ V ++M S       +        D
Sbjct: 509 GFAVVADEVRALAKRTSDSTGEIEQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARD 568

Query: 501 SLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNE 560
           S   +  SV E+ + N  I+ +A EQ  V  E+++++  I +  R +   A      S  
Sbjct: 569 SFEGIQTSVNEIRDQNLQISAAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGR 628

Query: 561 LQNTSHALSDVVGRFR 576
           L N S  L+ +VGRF+
Sbjct: 629 LSNLSDELNGLVGRFK 644