Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  276 bits (705), Expect = 2e-78
 Identities = 158/395 (40%), Positives = 238/395 (60%), Gaps = 2/395 (0%)

Query: 184 DKHGVNLTPITRPINFAGQDWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVT 243
           D  GV  T   RPI  AG  W L   +    I A  D +   + L  +    ++++ +V 
Sbjct: 272 DNQGVASTFYMRPI--AGTPWFLATALPTALITAQRDDVLGTLALLQIPMVLLLVLLAVY 329

Query: 244 MLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVA 303
            +    + +  L T +  LS G+ DLT+R+ + ++DE+G I +S+N FI  LQ M  +V 
Sbjct: 330 AIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGAIGHSVNRFIVYLQNMIGEVT 389

Query: 304 DSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTE 363
            ++  +  ++  L   +      L +H  ET+Q +TAI EMS++A ++AQ+A + A  T+
Sbjct: 390 QATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITEMSSTADTVAQNAAETAAFTQ 449

Query: 364 RTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNL 423
           R N +AD S+  V EA NSV+ L+ +VSS   ++  M +D  +I   L VIGAIA QTNL
Sbjct: 450 RANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQDAARITETLGVIGAIAGQTNL 509

Query: 424 LALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDS 483
           LALNAAIEAARAGEQGRGFAVVADEVRALA+RTQ STSQIN+ML  L     + V  M++
Sbjct: 510 LALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLTRLTAGVSSSVAAMEN 569

Query: 484 TRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEM 543
           T+  C+  A+ T  V   L+ +  SV+ +NNL+T IAT+A +Q  VT E++++M  I++M
Sbjct: 570 TQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAAEQQSAVTEEINRSMVQIRQM 629

Query: 544 VRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRVQ 578
           V +L  +     + +  L + +  +  ++GRF+V+
Sbjct: 630 VEELVQSGHATETNTQSLLDANGRVIALMGRFKVR 664