Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  223 bits (568), Expect = 2e-62
 Identities = 128/373 (34%), Positives = 198/373 (53%)

Query: 204 WQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLS 263
           W+ IG I    + A   +L W I     V A V  +   +   V  +P+  +   +  ++
Sbjct: 274 WRFIGLIKRDEVMAGATRLTWLIAAIAAVLALVFAIVGASFASVIVRPIRGVADGLQEIA 333

Query: 264 QGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSN 323
           +G GDLT++L V+ KDE   +    N F+  + Q+   + ++S ++  A       A + 
Sbjct: 334 EGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNM 393

Query: 324 LNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSV 383
                +  +  E   TA  EM A+A  +A+S   AA   +   R   + +Q + EA  SV
Sbjct: 394 NQAAGRQREAVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSV 453

Query: 384 NGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFA 443
             L   +    +T+ ++ +D+K IN++L  I +IAEQTNLLALNAAIEAARAG+QGRGFA
Sbjct: 454 LKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFA 513

Query: 444 VVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLN 503
           VVADEVRALA RT  ST +I+ +L  L   T+ V ++M  + +    + ER     DS +
Sbjct: 514 VVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFD 573

Query: 504 VVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQN 563
            +  SV  + + NT IAT+A EQ QV  E+++++A I    + +   A    + S  L +
Sbjct: 574 KIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTD 633

Query: 564 TSHALSDVVGRFR 576
            S  L  +VGRF+
Sbjct: 634 ISGQLKGLVGRFK 646