Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  201 bits (510), Expect = 7e-56
 Identities = 117/350 (33%), Positives = 195/350 (55%), Gaps = 1/350 (0%)

Query: 228 LALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNS 287
           +A+L+    ++ AS  ++      L+ L  ++ ++ +  GDL+ R+ +  KDE+GQ+ ++
Sbjct: 145 VAVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEK-TGDLSARVPLACKDEVGQMASA 203

Query: 288 INLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSAS 347
            N      Q++   VA +++++D     L++      + +     ET+QA TAI EM+A+
Sbjct: 204 FNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQHGMLGQQSETDQAATAINEMTAT 263

Query: 348 AGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQI 407
              IAQ A     L++  +  A   ++ VT    S+ GL   V   A  I +++ED+++I
Sbjct: 264 VHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLSTGVQQTAVMIQKLAEDSQKI 323

Query: 408 NSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDML 467
           N V+ VI +IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R Q ST +I  M+
Sbjct: 324 NGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEITRMV 383

Query: 468 ATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQR 527
           + L+  T + V  M  +    ++   +      +L  +T +VA+M   NT IA +A +Q 
Sbjct: 384 SALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAEITGAVAQMRESNTQIAVAAEQQS 443

Query: 528 QVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
            V  E+++ + +I+++            + SN+L   +  LS  +G+ ++
Sbjct: 444 HVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLATLAGELSKAIGQLKL 493