Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  202 bits (515), Expect = 3e-56
 Identities = 116/390 (29%), Positives = 210/390 (53%), Gaps = 3/390 (0%)

Query: 188 VNLTPITRPINFAGQDWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHV 247
           ++ TPI+      G DW +   ID     A   +      +A+L+    I V    ++ V
Sbjct: 240 LSFTPIS---GLPGADWYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQV 296

Query: 248 SFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSK 307
             +PL+ +   + +++QG GDLT+RL V SKDE G++ ++ N F+E++     +V+ +++
Sbjct: 297 LLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATR 356

Query: 308 EIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNR 367
           ++      +   + +++   ++ +  T     AI E+ A+   IA++A DA+      + 
Sbjct: 357 QVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASE 416

Query: 368 YADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALN 427
            AD+ ++ V + + +++ L  ++S     I  ++  T  I  +L VI  I++QTNLLALN
Sbjct: 417 QADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALN 476

Query: 428 AAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIH 487
           AAIEAARAGE GRGFAVVADEVR LA RTQ+S  +I+ M+ +L+  +   V  M++++  
Sbjct: 477 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTS 536

Query: 488 CEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKL 547
            EE+ E  N   + L  VT  + E++ +N  +A +  EQ  V   ++ ++  I  + ++ 
Sbjct: 537 SEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQG 596

Query: 548 NMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
             N  +     + L   ++ L  +V  F++
Sbjct: 597 VANLNETLKDCDALSQQANRLKQLVDSFKI 626