Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  201 bits (512), Expect = 4e-56
 Identities = 123/350 (35%), Positives = 201/350 (57%), Gaps = 5/350 (1%)

Query: 232 VCASVIIVASV--TMLHVSFKPLSRLNTL--VANLSQGNGDLTQRLAVESKDEIGQICNS 287
           VC  ++++A +  + L + F  LS+LNTL  V    +  GDL+ R+ + S DE+GQ+  +
Sbjct: 144 VCVLILMLAMLGASQLLIRFL-LSQLNTLKDVMLHVEKTGDLSARVPLASGDEVGQMAGA 202

Query: 288 INLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSAS 347
            N       ++   VA S+ ++D     L+       + +     ET+QA TAI EMSA+
Sbjct: 203 FNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSAT 262

Query: 348 AGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQI 407
              IAQ A     L++  +  A   +  V+   +S++GL + V   AE I +++ED+++I
Sbjct: 263 VHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQLAEDSQKI 322

Query: 408 NSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDML 467
           N V+ VI +IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R Q ST +I  M+
Sbjct: 323 NGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMV 382

Query: 468 ATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQR 527
           + L++ T + V+ M  +    ++   +     ++L  +T +VA+M   NT IA +A +Q 
Sbjct: 383 SALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQS 442

Query: 528 QVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           QV  E+++ + +I+++  +         + S+EL   +  L+  +G+ ++
Sbjct: 443 QVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLKL 492