Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  218 bits (556), Expect = 5e-61
 Identities = 123/373 (32%), Positives = 205/373 (54%)

Query: 204 WQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLS 263
           W  IG I+ + +   T +L W I +  +V A++  V       +  +P++ +   + +++
Sbjct: 274 WTFIGLIEQSEVMQTTTRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIA 333

Query: 264 QGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSN 323
           QG GDLT+ L +  +DE  Q+ N  N F+  ++ +   +  ++ +I       +  +   
Sbjct: 334 QGEGDLTRNLEIRGRDETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDM 393

Query: 324 LNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSV 383
                +  +  +   TA  EM A+A  +A+S   AA   +   + A E +Q +  AV+SV
Sbjct: 394 AEAAGRQREAVDMVSTAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSV 453

Query: 384 NGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFA 443
           + L +++   A++I ++  D+  I S+L  I +IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 454 DRLSHEIEQSAQSIQQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFA 513

Query: 444 VVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLN 503
           VVADEVRALA RT  ST++I+ +L  L + T  V ++M ++    +++  R     DS  
Sbjct: 514 VVADEVRALAKRTADSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFG 573

Query: 504 VVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQN 563
            + +SV  + ++NT IAT+A EQ QV  +++++++ I    + +   A      S  L  
Sbjct: 574 QIRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAG 633

Query: 564 TSHALSDVVGRFR 576
            S+ L  +V RFR
Sbjct: 634 LSNELDTLVRRFR 646