Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  204 bits (518), Expect = 1e-56
 Identities = 117/378 (30%), Positives = 202/378 (53%), Gaps = 6/378 (1%)

Query: 203 DWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANL 262
           +W L+  +  + I A   Q  W  +L     A V ++  V +     +P+ R+   +  +
Sbjct: 271 NWTLVAEVPESEIYAQMHQAVWLTSLIGGAVALVSLLLVVLLARGLVRPIRRVTAALVQI 330

Query: 263 SQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARS 322
             G GDL+ RL    +DE+G +    N F++  + +  +V  +S+ + RAV  ++    +
Sbjct: 331 GSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDN 390

Query: 323 NLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNS 382
                 +  + TE   TA+ EM  +   IA++A DAA  ++     A ++++ V  ++  
Sbjct: 391 TAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRG 450

Query: 383 VNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGF 442
           + G+   +   A+ +++++++   ++ VL VI +I+EQTNLLALNAAIEAARAGE GRGF
Sbjct: 451 IEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGF 510

Query: 443 AVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSL 502
           AVVADEVR LA RTQ ST ++  M+  LK    + V  M + +       E +     SL
Sbjct: 511 AVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASL 570

Query: 503 NVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNE-- 560
           + +TD V  ++++N  +AT+  EQ  VT E+++ +  I ++ R+    AA+V     E  
Sbjct: 571 SAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLARE---TAAEVQGCREECQ 627

Query: 561 -LQNTSHALSDVVGRFRV 577
            L+  +  L+  +G FR+
Sbjct: 628 ALRGLADDLARQMGGFRL 645