Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  206 bits (524), Expect = 2e-57
 Identities = 129/378 (34%), Positives = 204/378 (53%), Gaps = 16/378 (4%)

Query: 213 TAIQANTDQLN-------------WKITLALLVCASVIIVASVTMLHVSF-KPLSRLNTL 258
           T ++ NTDQ               + + + LLV A+V+  A   +L  S  KP+      
Sbjct: 165 TLVRINTDQTRATNEKAANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKC 224

Query: 259 VANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSN 318
              ++  +GDLT  +  E  DE  ++  ++    +KL+     +A S+ ++  A   L+ 
Sbjct: 225 AEQVA--DGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNA 282

Query: 319 QARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTE 378
               +   L Q   E EQA TA+ EM+++   +A++A   +  +   +R   + +  V E
Sbjct: 283 VTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVME 342

Query: 379 AVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQ 438
            V ++  +   V + A+ IT ++E ++ I  VL VI  +A+QTNLLALNAAIEAARAGE 
Sbjct: 343 TVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEA 402

Query: 439 GRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHV 498
           GRGFAVVADEVRALA RTQQSTS+I  M+ +++  TE  V+ M ++    E T       
Sbjct: 403 GRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGA 462

Query: 499 MDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVS 558
             +L+ +  +VA++N  N +IA++A EQ QV  EV +N+  I ++  +    A Q ++ S
Sbjct: 463 GMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAAS 522

Query: 559 NELQNTSHALSDVVGRFR 576
            EL   +  L+ +V RFR
Sbjct: 523 AELSRLAVDLNGLVARFR 540