Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas protegens RBAN4

 Score =  207 bits (527), Expect = 1e-57
 Identities = 122/404 (30%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 177 NGN---VIFSDKHGVNLTPITRPINFAGQDWQLIGYIDLTAIQANTDQLNWKITLALLVC 233
           NGN   V+   +  ++ TP+T        +W +   ID     A   Q      +A+ + 
Sbjct: 226 NGNQEVVLNKQERILSFTPVT---GLPNAEWYIGLSIDKDKAYAPLSQFRTSALIAMFIA 282

Query: 234 ASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIE 293
            +VI V    ++ V  +PL  +   + +++QG GDLT+RL VESKDE G++ +S N F+E
Sbjct: 283 VAVIAVLLTLLIQVLMRPLITMGRAMQDIAQGEGDLTRRLVVESKDEFGELGSSFNQFVE 342

Query: 294 KLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQ 353
           ++     +V+ +++++      +   + +++   ++ +  T     AI E+ A+   IA+
Sbjct: 343 RIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIAR 402

Query: 354 SADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQV 413
           +A DA+      +  AD+ +Q V + + ++  L  ++S     I  ++  T  I  +L V
Sbjct: 403 NAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDV 462

Query: 414 IGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTT 473
           I  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  +I+ M+ +L+  
Sbjct: 463 IKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVG 522

Query: 474 TENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEV 533
           +   V  M++++   EE+ E  N     L  VT  + E++ +N  +A +  EQ  V   +
Sbjct: 523 SREAVSTMNASQASSEESVEVANQAGARLVSVTQRIGEIDGMNQSVAAATEEQTAVVETL 582

Query: 534 SKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           + ++  I  + ++   N  +     + L   +  L  +V  F++
Sbjct: 583 NVDINQINLLNQQGVANLNETLKDCDALSQQASRLKQLVDSFKI 626