Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein McpP from Pseudomonas sp. DMC3

 Score =  224 bits (572), Expect = 5e-63
 Identities = 125/352 (35%), Positives = 208/352 (59%), Gaps = 1/352 (0%)

Query: 226 ITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQIC 285
           + +A+LV   VI  A + + +   +PL+ +   + +++ G GDLT+RL + S+DE+G++ 
Sbjct: 210 VGVAVLVLL-VIAAAGMLLANTILRPLTLMKANLDDIAAGEGDLTRRLNITSQDELGELA 268

Query: 286 NSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMS 345
            S N F++K+  +   + + + ++   V  +S QA+ +   + +   ET+Q  TAI EMS
Sbjct: 269 GSFNRFVDKIHGLVRQITEMTTQLTGLVTQVSEQAQRSDQAMERQRHETDQVATAINEMS 328

Query: 346 ASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTK 405
           A+A  +A+SA +AA+  ++T+     +K+ V  ++  ++ LV+ + +   ++  + +D  
Sbjct: 329 AAAQEVAKSAQNAAVAAQQTDEEGQSAKRVVAGSIKQIHALVDDIRNSGVSLDSLQQDVS 388

Query: 406 QINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQIND 465
            I  VL VI +IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALASRTQ ST +I  
Sbjct: 389 SIVGVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQISTQEIQG 448

Query: 466 MLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAME 525
           M+  L+  T+  V+ M  +    + T+++ N    SL+ +   +A +N++N  IA++A E
Sbjct: 449 MIDRLQAGTQQAVEAMRRSSEAGDGTSQQANQAGASLDAMAQLIATINSMNAQIASAAEE 508

Query: 526 QRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           Q  V  E+++++  I   V  +          S  L      L  +VG+FR+
Sbjct: 509 QTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGKLVGQFRI 560