Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  220 bits (560), Expect = 2e-61
 Identities = 120/359 (33%), Positives = 210/359 (58%), Gaps = 3/359 (0%)

Query: 222 LNWKITLALLVCASVIIVASVTMLHVSFK---PLSRLNTLVANLSQGNGDLTQRLAVESK 278
           +N  IT A++V   +I + ++     S K   PL  +   +A ++ G+GDLT+RL V+S 
Sbjct: 315 INNAITTAIIVAFVIIGLIALITYFASAKVTQPLVEMRNAMAEIAHGDGDLTKRLEVKSN 374

Query: 279 DEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAI 338
           DEIG +    N F +KL+ +  D A ++K +  A  HL + + +    +NQ   + +   
Sbjct: 375 DEIGALAIEFNTFTDKLRSLLKDTAANTKAVSDAADHLRDVSHATSKEINQERSQVDNVS 434

Query: 339 TAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETIT 398
           TA+ +M+A+   I+++A  ++    + +       + V +A+  +  L + +S   E + 
Sbjct: 435 TAVTQMAATVVEISKNAAQSSDAATKADELVQAGSEQVQDAMREIRALADAISQGVEVVG 494

Query: 399 RMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQ 458
            +S+++  I +V+ VI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ+
Sbjct: 495 GLSKESDSIGAVVDVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQE 554

Query: 459 STSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTL 518
           ST+ I  M+  L+  +E     M   +   +   ++T  V+++L  +T S+  ++  +T 
Sbjct: 555 STTDIRKMVERLQAMSEQTNSVMQEGQTRSQSGVDKTEKVVETLKDITQSIGLVHEQSTH 614

Query: 519 IATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           IA +  +Q +V  +++K++ AI  +  K + +A ++   + +L   S  L ++VG+F++
Sbjct: 615 IALATEQQTEVAQDINKSLVAITGLSDKTSQHAEELAVEATQLSAVSGDLKELVGQFKI 673