Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  211 bits (538), Expect = 5e-59
 Identities = 125/364 (34%), Positives = 193/364 (53%), Gaps = 4/364 (1%)

Query: 218 NTDQLNWKITLALLVCASVIIV----ASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRL 273
           NTD  N  +    ++ A V+ +     +V ++    + +  +   + +++Q NGDLT R+
Sbjct: 176 NTDSANTSLISTGVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDLTVRI 235

Query: 274 AVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQE 333
             +S+DEIG++    N F++KLQ +  DV ++S  +     +L         T++   + 
Sbjct: 236 ETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTIDVQQKS 295

Query: 334 TEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSM 393
              A  A++ MS S   +A SA  AA         A E +Q V + V S+  L   V   
Sbjct: 296 ATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLAENVRET 355

Query: 394 AETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 453
           A+ I R+  D+ ++ SVL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA
Sbjct: 356 ADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 415

Query: 454 SRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMN 513
           SRTQQST +I   +  L+    + V+ M         + E  N    SL  +T ++  +N
Sbjct: 416 SRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETITSTIGRIN 475

Query: 514 NLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVG 573
            +N  IA +  +QR V  ++ +++  I E   +    + ++ S+ NEL + +  L  +  
Sbjct: 476 QMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLAQHLESIAK 535

Query: 574 RFRV 577
           +FRV
Sbjct: 536 QFRV 539