Pairwise Alignments

Query, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Variovorax sp. SCN45

 Score =  450 bits (1158), Expect = e-131
 Identities = 229/496 (46%), Positives = 326/496 (65%), Gaps = 4/496 (0%)

Query: 11  PLSGWALFFGALCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAIS 70
           PL G A  +G + L+ A F+ +LD++IANVS+  I+G LG ST+QGT+VITS+AVA AI+
Sbjct: 13  PLEGAARVWGTVALSAATFMNVLDSSIANVSLPAISGDLGVSTTQGTWVITSFAVANAIA 72

Query: 71  VPLTGWLASRFGSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQT 130
           VPLTG++  RFG +R+F+   +LF V SLLCGLA +M+TL++FR L GFV GP++PLSQT
Sbjct: 73  VPLTGFMTQRFGQVRLFMASVILFMVASLLCGLAPNMTTLILFRALQGFVAGPMIPLSQT 132

Query: 131 LMIRIFPKNKSHAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALLC 190
           L++  +P+ K+  A+ +WSMTTLVAP+MGP+LGG + D +SWP+IF+I +P  I AA + 
Sbjct: 133 LLLSSYPRAKAGLAMAMWSMTTLVAPVMGPLLGGWITDNISWPWIFYINIPVGIVAASIT 192

Query: 191 WKLLKKFETKTTHSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIGF 250
           W L  K E+ T    ID +GLALLV++V ++QLMLD+GK+ DWF S +IV +AV+AV+GF
Sbjct: 193 WALYHKRESVTHKVPIDAIGLALLVLFVGSMQLMLDKGKELDWFHSPQIVTMAVVAVVGF 252

Query: 251 IAFLIWELTERNPVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTATI 310
             FL+WELT+++PVVDL +F+ R +    V  ++A+G FF   V+ PLWLQ +MGYTAT 
Sbjct: 253 AFFLVWELTDKHPVVDLSLFKRRNFWSGAVATAVAYGLFFGNVVLLPLWLQQWMGYTATQ 312

Query: 311 SGHATASMGILAVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFNTVDMTFSQISW 370
           +G   A +G+LA+F +PIV    SK DPR +     +   L  +MR        F  I  
Sbjct: 313 AGMIMAPVGMLAIFFSPIVGLTVSKIDPRRYATFSFLVFALVLWMRSNFNTQADFVTIII 372

Query: 371 PLFFQGIGMPLFFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHETR 430
           P   QGI M  FF+PL  I L  + P  + +A+GL NF+R  +GA  TS+  T W++   
Sbjct: 373 PTVIQGIAMAFFFIPLVTITLSGLTPDRIPAASGLSNFLRITAGAMGTSLTTTLWDNRAT 432

Query: 431 YVHAELAGLTDKA-GVATQAMQ---NSGMSAEQTRSAMDWILQNQSVMVATNQLFIVIAL 486
             H +L+   ++    AT AM    +SG S EQ    M+ I+  Q+ M+ATN +F   A+
Sbjct: 433 LHHTQLSETINQGNNAATSAMAGLGSSGFSTEQVLGQMNRIVDQQAYMLATNDIFYASAI 492

Query: 487 IFVFAACMIWFAPKPK 502
           +F+    ++W A   K
Sbjct: 493 LFLLLIPLVWLARPQK 508