Pairwise Alignments

Query, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Sphingobium sp. HT1-2

 Score =  491 bits (1264), Expect = e-143
 Identities = 242/490 (49%), Positives = 323/490 (65%), Gaps = 1/490 (0%)

Query: 22  LCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAISVPLTGWLASRF 81
           L LA++NF+ +LD TIANVSV +IAG+LG S  QGT++ITSYAVAEAI VPLTGWLA RF
Sbjct: 20  LVLALSNFMVVLDLTIANVSVPHIAGNLGISGDQGTWIITSYAVAEAICVPLTGWLALRF 79

Query: 82  GSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQTLMIRIFPKNKS 141
           G +R F+   + FG FS++CGL+ ++  +V  R+  G  GGP+MP+SQTL++RIFP    
Sbjct: 80  GVVRTFIWAMIGFGFFSMMCGLSTTLGMIVAARLGQGICGGPIMPMSQTLLLRIFPPEMR 139

Query: 142 HAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALLCWKLLKKFETKT 201
             A+G+W+MTTL+ P MGPI+GG + D  SW +IFFI +P A         +L+  ET T
Sbjct: 140 PRAMGLWAMTTLLGPAMGPIVGGYISDNWSWHWIFFINLPIAALCVFAAMAMLRPVETDT 199

Query: 202 THSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIGFIAFLIWELTER 261
            H  IDK+GL LL+ W+  LQ+MLD G+DHDWF    I+ LA++A IGFI F+IWELTE 
Sbjct: 200 AHQPIDKIGLCLLIFWIGCLQVMLDIGRDHDWFSDPLILTLAILAGIGFIVFIIWELTEE 259

Query: 262 NPVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTATISGHATASMGIL 321
           +P+VDL+VFRH G+S  + TL+LAFGA+FS  VV P WLQ+ MGYTAT SG  TA   + 
Sbjct: 260 HPIVDLRVFRHIGFSSGVFTLALAFGAYFSSIVVIPQWLQMSMGYTATWSGIVTAFTAMA 319

Query: 322 AVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFNTVDMTFSQISWPLFFQGIGMPL 381
           AV  AP  A  + K DPR  +   V WLG  T  R   T  + F  ++ P F QG  MP 
Sbjct: 320 AVMSAPFAARFTGKVDPRIMISGAVFWLGCMTLWRAHWTSGIDFFGLALPQFVQGFAMPF 379

Query: 382 FFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHETRYVHAELAGLTD 441
           F +PLT + LGSV P E  SAAGL NF+RT++ A ATS++ T W    R    ELAG   
Sbjct: 380 FMIPLTTLTLGSVPPSETASAAGLQNFLRTMAIAIATSLVLTGWSDSQRVSRNELAGAL- 438

Query: 442 KAGVATQAMQNSGMSAEQTRSAMDWILQNQSVMVATNQLFIVIALIFVFAACMIWFAPKP 501
           +   A +A+   GM+ EQ R  +  +++ +++ ++ + +F + AL+   AA ++W APKP
Sbjct: 439 QPDDAQRALSGMGMTTEQIRQTISNLVEQEAIAISVDYVFFISALVLFAAAVIVWLAPKP 498

Query: 502 KQAVDTSAVH 511
              VDTSA H
Sbjct: 499 SGPVDTSAAH 508