Pairwise Alignments

Query, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Serratia liquefaciens MT49

 Score =  398 bits (1023), Expect = e-115
 Identities = 201/497 (40%), Positives = 304/497 (61%), Gaps = 5/497 (1%)

Query: 10  QPLSGWALFFGALCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAI 69
           +PL G  L +  + LA+A F+ +LD+TIANV++  IAG+LG+S SQGT+VITS+ VA AI
Sbjct: 4   KPLEGAQLAWMTVALALATFMQVLDSTIANVAIPTIAGNLGSSNSQGTWVITSFGVANAI 63

Query: 70  SVPLTGWLASRFGSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQ 129
           S+P+TGWLA R G +R+F+    LF + S LCG++NS+  L+ FRV+ G V GPL+PLSQ
Sbjct: 64  SIPITGWLAKRIGEVRLFLWSTALFVLASWLCGISNSLGMLIFFRVIQGVVAGPLIPLSQ 123

Query: 130 TLMIRIFPKNKSHAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALL 189
           +L++  +P  K   A+ +WSMT +VAPI GPILGG + D   W +IFFI +P      L+
Sbjct: 124 SLLLNNYPPAKRAMALALWSMTVIVAPIFGPILGGYISDNYHWGWIFFINIPIGAVVILV 183

Query: 190 CWKLLKKFETKTTHSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIG 249
               LK  ETKT    ID VGL LL+V + +LQ+MLD+GK+ DWF S+ I+ L V+AV+ 
Sbjct: 184 AMSTLKGRETKTEIKPIDTVGLVLLIVGIGSLQVMLDQGKELDWFNSTEIIVLTVVAVVA 243

Query: 250 FIAFLIWELTERNPVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTAT 309
            +  ++WELT+ +PVVDL +F+ R +++  + +SLA+  +F   V+ P  LQ   GYTAT
Sbjct: 244 LLFLIVWELTDDHPVVDLSLFKSRNFTVGCLCISLAYMLYFGAIVLLPQLLQEVYGYTAT 303

Query: 310 ISGHATASMGILAVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFN-TVDMTFSQI 368
            +G A+A +G++ V L+PI+    ++ D R  V    +   +  + R +     M F   
Sbjct: 304 WAGLASAPVGLIPVLLSPIIGKFGNRLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGAS 363

Query: 369 SWPLFFQGIGMPLFFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHE 428
           +WP F QG  +  FF+PLT I L  + P  M +A+ L NF RTL+G+  TS+  T W   
Sbjct: 364 AWPQFIQGFAIACFFMPLTTITLSGLPPERMAAASSLSNFTRTLAGSIGTSITTTLWTQR 423

Query: 429 TRYVHAELAGLTDKAGVATQAM----QNSGMSAEQTRSAMDWILQNQSVMVATNQLFIVI 484
               H++L    +     +Q M    +  GMS +Q  + +   +  Q ++++ N++F + 
Sbjct: 424 ESQHHSQLTEFVNPYNPQSQEMYRQLEQIGMSKQQASAYIANEITAQGLIISANEIFWLS 483

Query: 485 ALIFVFAACMIWFAPKP 501
           A +F+    ++W A  P
Sbjct: 484 AGVFLVLLVLVWVAKPP 500