Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., DSBA oxidoreductase from Pseudomonas simiae WCS417

 Score =  187 bits (474), Expect = 6e-52
 Identities = 128/352 (36%), Positives = 190/352 (53%), Gaps = 23/352 (6%)

Query: 39  AAIVVAGGSYALY-WHF--IGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQ 95
           AAI + G    LY W      S   +T+NA    ++  + P + G + +V V D +YVK 
Sbjct: 43  AAIAIVGVLIVLYAWQLPPFSSAVETTENALVRGQVTIIGPQLSGYVFEVPVQDFQYVKA 102

Query: 96  GDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKA 155
           GD+LV+LDD   +  L QA A LA+ K  + + +       A ++ ++A        L  
Sbjct: 103 GDLLVRLDDRIYKQRLDQALAQLAVQKAALANVVQQRNSAEATIKLRQA-------ALAD 155

Query: 156 AQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLST 215
           +QA   ++  DL R E+L+  GSVS  EL   +   AQ  A       A+AQAQA+    
Sbjct: 156 SQAQARKSTADLRRNEELISDGSVSKRELDVTRAANAQTIA-------AVAQAQASL--E 206

Query: 216 IGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRRV 275
           I  Q     + +  ++++   V  A+A  E A+IDL  T I AP  G + +  V++G  V
Sbjct: 207 IARQDLQTVIVNRGSLEA--AVASAEAAVELARIDLSNTRITAPRDGQLGQIGVRLGAYV 264

Query: 276 QVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGTG 335
             G  LM +VP   ++V AN KE ++ +V+VGQPVT T D       +HG V   S  TG
Sbjct: 265 NSGAQLMALVPPQ-LWVIANMKETQMDNVQVGQPVTFTVDALNHR-KFHGTVQHISPATG 322

Query: 336 SAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAG 387
           S FS++ A NATGN++K+ QR+P+RI +DP   ++  L+ GLS+V +IDTAG
Sbjct: 323 SEFSLLQADNATGNFVKIAQRVPVRITVDPDQAESERLRPGLSVVVSIDTAG 374