Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  260 bits (665), Expect = 4e-74
 Identities = 151/393 (38%), Positives = 226/393 (57%), Gaps = 37/393 (9%)

Query: 15  NNSNTEFDGVRAAQSRKKGFLGLAAAIVVA----GGSYALYWHFIGSRYISTDNAYAAAE 70
           N + TE       + RK   +GLA  +V+A     G Y LY  F  S    TD+AY    
Sbjct: 6   NTNATEQPKDNNPRKRKVMLIGLALIVVLAVVGVWGWYELYGRFNES----TDDAYVNGN 61

Query: 71  IAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLA 130
           + E+TP V G +  +   D + V +G VLV  D  DA + L  A+A+LA   R+VR   +
Sbjct: 62  VVEITPLVTGTVVSIGADDGDLVHEGQVLVNFDPNDAAVGLQSAQANLARTVRQVRGLYS 121

Query: 131 NDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTG 190
           N +G+              KAQ+ A +AD + A+ + +RR+ L + G++S EEL++A+  
Sbjct: 122 NVDGM--------------KAQVNAQKADVQTAQDNFNRRKALAQGGAISQEELSHARD- 166

Query: 191 FAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKID 250
                 +L AAK A+   +          K   AL D+T + S+P+V  A A+  QA + 
Sbjct: 167 ------SLTAAKNALTNLEQ-------QLKTTNALVDDTVISSHPDVQAAAAQLRQAYLT 213

Query: 251 LERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPV 310
             R+ + AP++G VAKR VQ+G+RVQ G  LM V+P + +++DANFKE +LRD+++GQPV
Sbjct: 214 NARSTLIAPVTGYVAKRTVQLGQRVQPGTALMAVIPLNQLWIDANFKETQLRDMRIGQPV 273

Query: 311 TLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQA 370
            + +D+YG DV + G +     GTGSAF+++PAQNATGNWIK+VQR+P+RI ++  +L  
Sbjct: 274 DIESDIYGSDVKFSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHINADELAK 333

Query: 371 YPLQVGLSMVATIDTAGTTDPQTLVQYRAAKVS 403
           +PL+VGLS +  +D    + P  L Q    K S
Sbjct: 334 HPLRVGLSTLVNVDLHDQSGP-VLAQQAPQKAS 365