Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., DSBA oxidoreductase from Pseudomonas simiae WCS417

 Score =  162 bits (411), Expect = 1e-44
 Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 21/343 (6%)

Query: 55  IGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQA 114
           +GS+  +T++A+ AA+   V P V G I +V V D + VK G +L  +DD D R A   A
Sbjct: 29  LGSKRQTTNDAFVAADFTLVAPRVAGFIKEVLVEDNQRVKAGQLLALIDDRDFRAAAQAA 88

Query: 115 EADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLV 174
           +AD  +A+ ++++        +A +E Q +   + +A + A +A+   A+ +L+R   L 
Sbjct: 89  DADTLVAQAQLKN-------ATATLERQSSVIAQAQATVAADRAEMAFAEHELNRYNHLA 141

Query: 175 RSGSVSGEELTNAKTGFAQAQANL-NAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDS 233
             G+ + +    AKT   QA A L NA     A+ +  ++ T     A   L        
Sbjct: 142 GVGAGTVQNAQQAKTRIDQATARLANATAVLAAERKQVEILTAQRDAAEGGLK------- 194

Query: 234 NPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVD 293
                 A+A  E A   L  T I AP+ G+V +R V+VG  V  G  ++ VVP +  YV 
Sbjct: 195 -----RAQAALELASFQLSYTRIVAPVDGMVGERAVRVGAYVTPGSKILAVVPLEEAYVV 249

Query: 294 ANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKV 353
           ANF+E +L  ++ GQ V +  D   D    +G +   +  TG  F+ +   NATGN+ KV
Sbjct: 250 ANFQETQLSHMRAGQAVQVRVDSL-DGELLNGHLESLAPATGVTFASVKPDNATGNFTKV 308

Query: 354 VQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAGTTDPQTLVQ 396
           VQR+P++I L+P       L+VG+S+ A++DT      + + Q
Sbjct: 309 VQRIPVKIVLEPNQAHTERLRVGMSVEASVDTQSVAQTREVAQ 351