Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 8e-49
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 22/351 (6%)

Query: 34  FLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYV 93
           F  L A I +A   +  +W+F G  Y STDNAY   EI  ++  +G  I  V V D ++V
Sbjct: 48  FFALVAIIALA---FLGHWYFKGRFYESTDNAYVQGEITRISSQLGARIETVPVEDNQHV 104

Query: 94  KQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQL 153
            +GD+LV+L+  D  LA+ +A A LA  +       +      +++ A +A       QL
Sbjct: 105 SKGDLLVRLEAADFELAVERARAALATREAEYAQAQSRLTQQGSLIAAGQA-------QL 157

Query: 154 KAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKL 213
            A QA F+R+++DLSR E L + G VS E +T        A + ++ A+A + Q+Q  ++
Sbjct: 158 AATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVAGSQVDKARADL-QSQRQQV 216

Query: 214 STIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGR 273
           + + ++              + ++  A+    QA+++L R  I APISG + +R  + G+
Sbjct: 217 TALNAELKRL----------DAQIANARTDLAQAELNLTRCEIHAPISGTIGQRNARNGQ 266

Query: 274 RVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGG 333
            VQ G  L+++VP + I+V ANFKE ++  +  GQ   L  D Y  D    G V      
Sbjct: 267 VVQAGAYLLSIVPDEDIWVQANFKETQIGRMHPGQRAELLFDSY-PDTPIEGRVDSLFAA 325

Query: 334 TGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATID 384
           +G+ FS++P  NATGN+ KVVQR+PI++     +     ++ G+S+ AT+D
Sbjct: 326 SGAQFSLLPPDNATGNFTKVVQRIPIKLTFHADNPLHGRIRPGMSVTATVD 376