Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., HlyD family secretion protein from Magnetospirillum magneticum AMB-1

 Score =  181 bits (459), Expect = 3e-50
 Identities = 123/356 (34%), Positives = 192/356 (53%), Gaps = 20/356 (5%)

Query: 31  KKGFLGLAAAIVVAGGSYALY-WHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVD 89
           KK     AA ++V+ GS++ Y W        STD+AY   +I  ++P V G + ++   D
Sbjct: 2   KKPIAIAAALVLVSFGSWSAYRWSQEWRWMESTDDAYVDGDITTISPKVAGHVVELLARD 61

Query: 90  TEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRV 149
              V +GDVLV++D+ D R  L +A         +V++ LA    +   V  QEA   + 
Sbjct: 62  NRAVAKGDVLVRIDERDYRARLDEAAG-------QVKARLAQLIQIDDRVAVQEAVITQS 114

Query: 150 KAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQ 209
            A + AA+A+  RAK D  R   LVR   VS +     +   A+A+A L  + A + QA 
Sbjct: 115 GASISAARAEMVRAKADYERSRALVREDYVSRQRFDITQADAARAEAGLTGSGAGL-QAA 173

Query: 210 ATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQV 269
             +LS + S++ N AL          ++  AKA    A+ +LE T IR+P+ G++  R V
Sbjct: 174 RRQLSVLASER-NVALA---------QLEQAKATLVVAETELEATTIRSPVDGVIGNRAV 223

Query: 270 QVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAG 329
           + G+ V+ G  L+ VVP  ++++DANFKE ++  +  G  V +  D +   V   G V  
Sbjct: 224 RDGQYVRPGQTLLAVVPLGNVWIDANFKETQIGRMTPGNRVEIKVDAFPGAV-IGGSVDS 282

Query: 330 FSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDT 385
           F+  +G+ FS++P +NATGN+ KVVQR+P+RI +D     A  L+ GLS+V  +DT
Sbjct: 283 FAPASGAKFSLLPPENATGNFTKVVQRIPVRIRVDQDSPLAGQLRPGLSVVVKVDT 338