Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., HlyD family secretion protein from Erwinia tracheiphila SCR3

 Score =  164 bits (415), Expect = 4e-45
 Identities = 125/375 (33%), Positives = 187/375 (49%), Gaps = 16/375 (4%)

Query: 6   LNRLSSMNSNNSNTEFDGVRAAQSRKKGFLGLAA-AIVVAGGSYALYWHFIGSRYI-STD 63
           ++  S+ + ++   + D V   + ++ G   L   AIVV        W ++ +R I STD
Sbjct: 1   MHNQSTSHPDDKQQQQDNVEQPERQRPGKKPLVILAIVVVIVLIIALWFWLSTRNIESTD 60

Query: 64  NAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKR 123
           +A+  A+   + P   G + Q+ V D + VK+GD+LV +D  DA     QAEA LALA  
Sbjct: 61  DAFTDADAVTIAPKASGYVTQLLVRDNQRVKKGDLLVVIDPRDAMAQRDQAEAQLALA-- 118

Query: 124 RVRSYLANDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEE 183
            V  +   +  LS       A + +  AQ   A+A+F  A+ D  R+   V   + S   
Sbjct: 119 -VSQWHQAEAQLSLSEVQYPAQKDQALAQQAKAEANFLNAQEDYKRQRG-VDPRATSQRS 176

Query: 184 LTNAKTGFAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKAR 243
           +  A      A+A L +AKA +  A    L  I  QK N             +V  A+A+
Sbjct: 177 IDAASAQLRSAKAELESAKAQVEVASQIALQ-IRQQKTNVEA-------RQAQVQQAQAQ 228

Query: 244 YEQAKIDLERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRD 303
              A ++L    +RAP  G V +R VQ+G  VQ G  L ++V  D  ++ ANFKE +L  
Sbjct: 229 LNIANLNLSWMEVRAPYDGFVTRRNVQMGTLVQAGTSLFSLVSAD-TWITANFKESQLSR 287

Query: 304 VKVGQPVTLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIEL 363
           +K G  V +T D +  D   HG V     G+GS FS  PA+NATGN++K+VQR+P++I +
Sbjct: 288 MKPGNKVEITIDAW-PDRKLHGHVDSIQMGSGSRFSTFPAENATGNYVKIVQRVPVKIVI 346

Query: 364 DPKDLQAYPLQVGLS 378
           D       PL +GLS
Sbjct: 347 DEGLDPNRPLPLGLS 361