Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., HlyD family secretion protein from Erwinia tracheiphila SCR3

 Score =  171 bits (433), Expect = 3e-47
 Identities = 122/351 (34%), Positives = 178/351 (50%), Gaps = 25/351 (7%)

Query: 37  LAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQG 96
           LA  I++   +    W  +  R  ST++A   A+   V P   G I  V+V D ++V+ G
Sbjct: 12  LALMILLMLAAILFVWSGMHLRQNSTEDAVIMADYTTVAPKASGYIHVVSVSDNQHVEAG 71

Query: 97  DVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAA 156
            +L  LDD D R+AL  AEA+L ++  ++ S         A +E Q+A   +  A + A+
Sbjct: 72  QLLATLDDRDYRVALESAEANLKISVAKLAS-------TEAQLEQQQAVIAQSDAAVSAS 124

Query: 157 QADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANL--NAAKAAMAQAQATKLS 214
           QA  E A  +  R   L+ SG+ + +E         +A A L  N A A  A+ + T L 
Sbjct: 125 QAALEYAGQNAGRYRRLLVSGTATADEQQKTVATMREAAAALHQNEAVALSARKEVTVLQ 184

Query: 215 T-IGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGR 273
             I   KAN A +              +A  +QA+++L  T I API+G + +R  + G 
Sbjct: 185 AEIRQAKANIAAS--------------QASVDQARLNLSYTRITAPIAGFIGQRSARPGA 230

Query: 274 RVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGG 333
            V  G  L+ VVP    YV ANF E +L +V  GQPV++  D     V   G +   +  
Sbjct: 231 WVSAGTRLLAVVPLQQSYVSANFLETQLDNVHTGQPVSVRVDAL-PGVILRGHIDSIAPA 289

Query: 334 TGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATID 384
           TGS F+ I A NATGN+ KVVQRLP++I LDP       L+VG+S+V TI+
Sbjct: 290 TGSTFAAITADNATGNYTKVVQRLPVKILLDPNQQDLARLRVGMSVVPTIE 340