Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., efflux pump membrane protein (multidrug resistance protein A) from Enterobacter asburiae PDN3

 Score =  256 bits (654), Expect = 8e-73
 Identities = 150/394 (38%), Positives = 221/394 (56%), Gaps = 29/394 (7%)

Query: 11  SMNSNNSNTEFDGVRAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAE 70
           S N+ ++  +  G +  + RK   L L    ++   +Y +YW  +      TD+AY A  
Sbjct: 2   SANAESTTPQQPGNKKGK-RKSALLLLTLLFIIIAVAYGIYWFLVLRHAEETDDAYVAGN 60

Query: 71  IAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLA 130
             ++   V G + +V   +T++V++GDVLV LD TDA+ A  +A+  LA + R+ R  + 
Sbjct: 61  QVQIMAQVSGSVTKVWADNTDFVQKGDVLVTLDPTDAQQAFEKAQTALASSVRQTRQLMI 120

Query: 131 NDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTG 190
           N + L A ++ Q       K  L  AQ+D       L+RR  L  +  +  EEL +A+  
Sbjct: 121 NSKQLQANIDVQ-------KTALAQAQSD-------LNRRVPLGTANLIGREELQHARDA 166

Query: 191 FAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKID 250
            A AQA L+ A              I    AN A+   T++++ P V  A      A + 
Sbjct: 167 VASAQAQLDVA--------------IQQYNANQAMVLGTSLENQPAVQQAATEVRNAWLA 212

Query: 251 LERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPV 310
           L+RT I +P++G V++R VQ G ++    PLM VVP D+++VDANFKE +L  +++GQ  
Sbjct: 213 LQRTKIVSPMTGYVSRRSVQPGAQISPTTPLMAVVPADNLWVDANFKETQLAHMRIGQTA 272

Query: 311 TLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQA 370
           T+ +D+YGDDV Y G V G   GTGSAFS++PAQNATGNWIKVVQRLP+RIELD K L  
Sbjct: 273 TVVSDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQLAD 332

Query: 371 YPLQVGLSMVATIDTAGTTDPQTLVQYRAAKVSE 404
           +PL++GLS + T+DTA         Q R++   E
Sbjct: 333 HPLRIGLSTLVTVDTANRDGQILASQVRSSPAYE 366