Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score =  400 bits (1029), Expect = e-116
 Identities = 201/369 (54%), Positives = 277/369 (75%), Gaps = 1/369 (0%)

Query: 16  NSNTEFDGVRAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVT 75
           N N E   ++  + RK+ F  LA +I +AG     YW  +GSRY+ TDNAY   E A+++
Sbjct: 9   NQNIESSDIKK-KKRKRLFSYLALSIALAGAGSFAYWELVGSRYVETDNAYTDVESAQLS 67

Query: 76  PAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGL 135
            A+ G ++ + V D++ VK+GDVL+QLD TDA LAL QAEA+L LA RRV  Y A D  L
Sbjct: 68  SAITGTVSAILVTDSQVVKKGDVLIQLDPTDAELALNQAEANLNLAIRRVNGYKATDTKL 127

Query: 136 SAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQ 195
            A V A E  ++R+ AQ+ AA ADF+RA +DL RRE L+++G++SG+ELT  +  +A A 
Sbjct: 128 GAEVVANEKEQKRLLAQVDAANADFQRATVDLKRREALMQTGAISGDELTRIQNVYASAL 187

Query: 196 ANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTV 255
           ANLNAAKAA+AQA A + + +G+++ANA + ++   ++NPEV LA+A+ +QA++DLERTV
Sbjct: 188 ANLNAAKAAVAQADAARQAAVGARQANAVMIEDANTETNPEVALARAKRDQARLDLERTV 247

Query: 256 IRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTAD 315
           IR+P+ G+VA+RQV++G+RVQ   PL++VVP   I+V+ANFKEV+L+ VKVGQ V L +D
Sbjct: 248 IRSPVDGVVARRQVELGQRVQPSTPLLSVVPVQQIHVNANFKEVQLQHVKVGQKVELVSD 307

Query: 316 LYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQV 375
           LYGD V +HG V GF GGTG+AFS+IPAQNATGNWIKVVQRLP+RI+L+  +L A+PL+V
Sbjct: 308 LYGDSVPFHGTVEGFDGGTGAAFSIIPAQNATGNWIKVVQRLPVRIKLNADELAAHPLRV 367

Query: 376 GLSMVATID 384
           GLSM AT++
Sbjct: 368 GLSMKATVN 376