Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  275 bits (703), Expect = 2e-78
 Identities = 152/365 (41%), Positives = 223/365 (61%), Gaps = 37/365 (10%)

Query: 29  SRKKGFLGLAAAIVVAGGS-----YALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIA 83
           SR+KG+  +   +++ G +     Y LY  F    Y +TDNAY    +  +TP VGG + 
Sbjct: 13  SRRKGYFAILLLVLLLGAAGSTAYYQLYLRF----YETTDNAYVGGNLITLTPQVGGTVT 68

Query: 84  QVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQE 143
           QV+V D +YV++G +LVQL  +D  +AL Q+EA LA A R+VR       GL + V+   
Sbjct: 69  QVSVDDGDYVEKGQLLVQLSQSDTLIALQQSEAQLASAVRQVR-------GLYSTVD--- 118

Query: 144 ANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKA 203
                 +AQ+ + Q   ++A  D +RR+ L   G++S E+L + +     A++ L+AA+ 
Sbjct: 119 ----NYQAQVASRQVALQQAIGDYNRRKGLATKGAISAEDLAHYQDAVNSARSALDAAEQ 174

Query: 204 AMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGI 263
           A+              + N A  DNT +D +P++  A A      +D  R+ + AP+SG 
Sbjct: 175 AL--------------RTNQARVDNTVLDDHPDIKNAVADLRSKYLDWARSAVVAPVSGY 220

Query: 264 VAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTY 323
           VA+R VQVG RV  G  LMT+VP D ++VDANFKE ++  +++GQPVTLTAD+YGD   Y
Sbjct: 221 VARRAVQVGMRVSAGATLMTIVPLDQVWVDANFKESQMLQMRLGQPVTLTADIYGDKNVY 280

Query: 324 HGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATI 383
           HG +     GTGSAFS++PAQNA+GNWIK+VQRLP+RI L+P+ L+  PL++GLSM+A +
Sbjct: 281 HGTIQSLGIGTGSAFSLLPAQNASGNWIKIVQRLPVRIALEPEGLKQRPLRIGLSMLANV 340

Query: 384 DTAGT 388
           D   T
Sbjct: 341 DLHNT 345