Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Colistin resistance protein EmrA from Azospirillum sp. SherDot2

 Score =  167 bits (424), Expect = 4e-46
 Identities = 119/355 (33%), Positives = 184/355 (51%), Gaps = 23/355 (6%)

Query: 35  LGLAAAIVVAGGSYALYW-HFIGSRYISTDN-AYAAAEIAEVTPAVGGIIAQVNVVDTEY 92
           LGLA  ++VA   +A  W  ++GS    T N AY  A+I  ++  V G++  + V D + 
Sbjct: 44  LGLAVVLLVA---FATRWDRWLGSAARQTTNDAYLQADITPLSAQVAGVVRDMPVEDFQR 100

Query: 93  VKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQ 152
           VK GD +  + D D R  + QA+A L  A   +           A+V+  EAN       
Sbjct: 101 VKAGDPVATIVDDDYRARVQQADAALEAADAAIAQLDIQKRTQRALVDQAEAN------- 153

Query: 153 LKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATK 212
           +   +A+  RA+++ +R+  L   G      +        QAQA    A+AA+   QA  
Sbjct: 154 VHGLEAEAWRARLEEARQRSLTEQG------VAGTLQALQQAQATSRRAQAALEAGQAQ- 206

Query: 213 LSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVG 272
              +  QKA     D     +       +A  + A+I L+RT IRAP  G+V +RQV+ G
Sbjct: 207 ---VDQQKAALDGIDVQVRQAKATRQQRQADLDLARITLDRTTIRAPADGMVGQRQVRPG 263

Query: 273 RRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSG 332
           + V  G  ++T+VP   ++V AN+KE ++  ++ G P T+  D +  DVT  G VA  S 
Sbjct: 264 QYVGQGSQIVTLVPLPAVWVIANYKETQMTRIRSGLPATVRIDSF-PDVTLTGRVAAQSP 322

Query: 333 GTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAG 387
            +GS F+++P  NATGN+ K+VQR+P++I LD  +     L+ G+S+V TIDT G
Sbjct: 323 ASGSQFALLPPDNATGNFTKIVQRIPVKIVLDDPNPLQDRLRPGMSVVVTIDTDG 377