Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., putative multidrug resistance protein EmrK from Acinetobacter radioresistens SK82

 Score =  344 bits (882), Expect = 3e-99
 Identities = 181/355 (50%), Positives = 246/355 (69%), Gaps = 1/355 (0%)

Query: 30  RKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVD 89
           RKK    +A   +VA   YAL W +  SR +STDNAY  A+ A++T  V G + +V V D
Sbjct: 26  RKKLLKIVAILFIVAVLIYAL-WMYFASRSVSTDNAYVGADTAQITSMVSGQVTEVLVKD 84

Query: 90  TEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRV 149
           T+ VKQGDVLV++D  DA++AL QA+A+LA AKR+     AN + L++ V  +       
Sbjct: 85  TQQVKQGDVLVRIDPRDAKIALAQAQAELAKAKRQYNQTSANSQSLNSQVSVRADEIASA 144

Query: 150 KAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQ 209
           +AQ+K A+AD  +A+ D  RR  L  +G++S EE+++A+T    A+A+L  A+A ++QA+
Sbjct: 145 QAQVKKAEADLAKAQADYERRRKLSETGAISKEEMSSAQTVLDTARASLTLAQAGLSQAE 204

Query: 210 ATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQV 269
           A + +   +  AN AL    T  S P+VL+A+AR EQA +DLERT + AP+ G+V++R V
Sbjct: 205 ANRKAAQSTLAANEALIRGATERSTPDVLIAQARVEQAMLDLERTEVHAPLDGVVSRRNV 264

Query: 270 QVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAG 329
           QVG+RV  G  LM VVP   +YVDANFKE +L  V+ GQ V L +D YGD+V YHG V G
Sbjct: 265 QVGQRVAPGNSLMVVVPVAQLYVDANFKESQLAKVRTGQAVELISDFYGDEVVYHGKVLG 324

Query: 330 FSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATID 384
           FSGGTG+AF++IPAQNATGNWIKVVQRLP+RI LDPK+L  +PL+VGLSM AT+D
Sbjct: 325 FSGGTGAAFALIPAQNATGNWIKVVQRLPVRIALDPKELAQHPLRVGLSMNATVD 379