Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., efflux transporter outer membrane subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  261 bits (667), Expect = 4e-74
 Identities = 155/470 (32%), Positives = 248/470 (52%), Gaps = 6/470 (1%)

Query: 11  LHKAAPYFTASLLSAFVLTGCSVPDHYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQ 70
           LH+ A    A+      L  C+         T  + + L +  + +  +   WP+ +WW 
Sbjct: 3   LHQLA----AAAALTLALAACASSGGLHPEGTPTDPSTLKAGRSLAQLSAAAWPTTDWWT 58

Query: 71  RYQDAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSER 130
              D QL+ LI EALQ +P L +A AR + AQ  A  A A R   +   A+   ++    
Sbjct: 59  GLGDRQLDALIAEALQDNPGLGVADARARAAQAAAGFADAARGPSVNGGAAVAGARPPPA 118

Query: 131 YQSATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIA 190
                       YG  +  F++D D WG  RAA  AA  +  AAE ++ AAR+ +S ++A
Sbjct: 119 LLGDKAHFAIAKYGYTS--FKWDLDPWGGKRAAWEAALGQARAAEVDARAARIELSGNVA 176

Query: 191 NAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLG 250
            AY +L   +  Q+   A LQ      EL  +R A G++   ++ Q  A  AS E +   
Sbjct: 177 RAYVQLGYAFTQQDLADAELQRAGSARELTRQRVAAGIDNQVALKQGDAEVASAEQQAAL 236

Query: 251 IQESIQLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWR 310
            + ++   +++LA L+G+GPDR   +E P     +   +P++  + L+GHRAD+ AARWR
Sbjct: 237 ARRAVDAARSSLAVLLGKGPDRGLQLERPRQLAPAALAVPAKLPLELVGHRADLVAARWR 296

Query: 311 AEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLE 370
            EAA + +  A+ +F PD+++ A  G  + G  +          +GP++ LP+F GGRL 
Sbjct: 297 VEAAGKDIRAAKTEFLPDISIGAMAGLVSLGGANPLSLAGRFYQVGPSLSLPIFDGGRLR 356

Query: 371 GQLTSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQALHIAT 430
             L++ +A+Y  AVAQYN TLV AL +VAD +++ ++LQ +I   ++A   A+QA  +A 
Sbjct: 357 ANLSAKDAQYDLAVAQYNQTLVGALNQVADELSALKSLQTQIAAQQRAQDAAQQAWDLAE 416

Query: 431 NRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFE 480
            RYQ G+ +YL+ L   + LL  +R    L+++   L + LI ALGGG++
Sbjct: 417 QRYQAGVGSYLEALSVRQQLLAVERGSAALEAQQADLSVQLIQALGGGYQ 466