Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 4e-48
 Identities = 147/479 (30%), Positives = 222/479 (46%), Gaps = 35/479 (7%)

Query: 22  LLSAFVLTGCSV-PDHY-PDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQDAQLNH 79
           LL A +LTGC++ PD   PD     +   L      S Q + +     WW+ + DA+L+ 
Sbjct: 10  LLLAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAAS-QPQAEPLELRWWETFHDARLSA 68

Query: 80  LIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATES-KVSERYQSA-TPP 137
           LI+   + +  L+MA ARL        Q+ A+RS    LAA    S  V+  Y  A    
Sbjct: 69  LIQRVAERNLDLQMASARLL-------QSRALRST---LAADEVPSVDVNAGYSRARNSA 118

Query: 138 DGWND----YGTLTLNFQ-------YDFDFWGKNRAAVVAATSELAAAEAESVAARLMIS 186
           DG +D     G    N         ++ D WG+ R  V AA + +  AE +     L + 
Sbjct: 119 DGLSDPSGKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALL 178

Query: 187 TSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEA 246
           +  A  Y +L  +    +     L+V   +++L + R A G+ T   V+QA A  AS+E+
Sbjct: 179 SETAGNYIQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIES 238

Query: 247 ELLGIQESIQLQKNALAALVGQGP-----DRAASIEEPHITLTSRYGLPSEAGVGLLGHR 301
            L  ++       NAL+ L  + P     +     E P        GLPSE    L   R
Sbjct: 239 RLPSLEAQRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSE----LAERR 294

Query: 302 ADITAARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYL 361
            DI  A  R  AA   +G+A+A FYP + LS  +G+QA  L       +   A GP + L
Sbjct: 295 PDIRQAEARLHAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSL 354

Query: 362 PLFTGGRLEGQLTSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQ 421
           P+F GGRL+G L   EA+ QEA   Y   ++ A +E+ DV+    A Q R +   +AV+Q
Sbjct: 355 PIFEGGRLKGTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQ 414

Query: 422 AEQALHIATNRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFE 480
              AL  A  +Y  G   +L+VL  + +LL ++   ++  +      + L  ALGGG++
Sbjct: 415 NRIALETAQRQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473