Pairwise Alignments

Query, 200 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 26/211 (12%)

Query: 2   RVKSEEKRQAI----LEIAKDSFTKQGFEQTSMSHIAKMLGGSKATLYNYFSSKEEIFTA 57
           +VK+E ++QAI    ++ A++ F  QG E  +M  +A+ +G +  +LY YFS KE +  A
Sbjct: 4   KVKTEVEKQAIRMLIMDAARELFIHQGIEAVTMRAVAQRVGYTATSLYLYFSDKEALIRA 63

Query: 58  VMESSATEQIALSFLSLDHNRELKPALLEFGYNFLNSVLTQDAMSIYRMAIH------EA 111
           V+++    ++A +  S     +     L+FG +++   L     + YRM           
Sbjct: 64  VVDADFL-KLAQALKSTFEISDPLQRFLQFGQHYIEFALKYP--NHYRMMFMTPHPPLAP 120

Query: 112 DRSAIGRHFYENGPKRGWARLSRYITCQIECGSLKE--CDPWI------AAMHFKALLSA 163
           + S+I RH   N  +  +A+L   +T   + G  +    DP +      +AMH   L + 
Sbjct: 121 ELSSIERH---NPEQDAYAQLIEVVTSAWQAGIFRPTLTDPVLIAQTVWSAMH--GLCAL 175

Query: 164 QYFEPFSLGAIEKPTSSELKATTQRAVEAFL 194
           Q           +P  S ++A  Q     FL
Sbjct: 176 QINMCHDAWVNWRPLESRMQAMVQMWTNGFL 206