Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  305 bits (781), Expect = 2e-87
 Identities = 168/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           SFS LGL++ +V+ + +  +  PT IQ +AIP +L GRDLI  AQTGTGKTA+F LPIL+
Sbjct: 27  SFSSLGLAEPIVRALTEANHVTPTPIQAEAIPQVLAGRDLIGIAQTGTGKTAAFALPILD 86

Query: 62  KL-RQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
           +L R  +    K VRAL+L PTREL+ Q+ +  E++G+   +      GGV    Q + L
Sbjct: 87  RLVRHPRRPDPKSVRALVLSPTRELSGQIVDNFEKFGRHARISVTLAIGGVPMGRQIRAL 146

Query: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ 180
             GVDVLVATPGRLMDL    AV  +++E++VLDEAD+MLDMGF+ +I  I+  LP +  
Sbjct: 147 ARGVDVLVATPGRLMDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHKRH 206

Query: 181 FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE 240
            L FSAT+   + ELA   + DP  +++     +   + Q +I VDK  K  LL+ +++ 
Sbjct: 207 SLFFSATMPPAIAELAGGMLHDPVRVAVTPVAKTADRVEQRVIHVDKPNKGQLLAEVLST 266

Query: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
           ++ D+AL+F  TKHGA K+V  L K GI AEA H  +SQ  R ++L  F+ GKI+ L+AT
Sbjct: 267 EEIDRALVFARTKHGADKVVRVLAKCGIAAEAIHGNKSQNQRDRVLLAFREGKIRTLIAT 326

Query: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIE 359
            +AARGID+  +S V+NYDLP   + YVHRIGRT RA   G AISF   +    L  IE
Sbjct: 327 DIAARGIDVTGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAYLKSIE 385