Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  339 bits (869), Expect = 1e-97
 Identities = 175/383 (45%), Positives = 255/383 (66%), Gaps = 3/383 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           ++FSQLGL   L+ T+++LG   PT IQ QAIP +LQG+D++A AQTGTGKTA+F LP++
Sbjct: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query: 61  EKLRQGQTQRK---KRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK 117
           ++  +   QR+   K +RAL+LVPTRELA QV + ++ Y K T LK +AV+GG   + Q 
Sbjct: 66  QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query: 118 QRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
             L  GVD+L+ATPGRL+D    ++++  ++E++VLDEADRMLDMGF+  + +++  L  
Sbjct: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
             Q L FSAT   K++ +A   +RDP E+ +  + ++   + Q +  VDK  K  LLS+L
Sbjct: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245

Query: 238 INEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYL 297
           I  + W Q L+F +T+ G+  L  +L+  GI A + +  +SQ  R + L+DFK+GK++ L
Sbjct: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305

Query: 298 VATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCM 357
           +AT VAARG+DI QL +VVNYD+PF A++YVHRIGRTGRA   G A+S +S D    L  
Sbjct: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365

Query: 358 IESRLGHLIERRVVEGFEPKKPV 380
           IE  L   + +  ++GFEP   V
Sbjct: 366 IERLLNTRLPQEWLKGFEPSPVV 388