Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola ME23

 Score =  366 bits (940), Expect = e-106
 Identities = 198/378 (52%), Positives = 252/378 (66%), Gaps = 2/378 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           MSF  LGLS  +++ V + GY++PT +Q QAIPV+L+GRDL+A+AQTGTGKTA F LP+L
Sbjct: 1   MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  EKLRQGQTQRKKR--VRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQ 118
           + L Q  +Q K R  VRALIL PTRELA Q+ E V  Y +   L+SL VFGGV    Q  
Sbjct: 61  QLLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGGVSINPQMM 120

Query: 119 RLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSE 178
           +L  GVD+L+ATPGRL+DL  Q AV   ++E++VLDEADRMLDMGFI  I +++  LPS+
Sbjct: 121 KLRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPSK 180

Query: 179 VQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLI 238
            Q LLFSAT S +++ELA   + +P  + +         ++Q +  VDK  K  LLSHLI
Sbjct: 181 RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSHLI 240

Query: 239 NEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLV 298
            +  W Q L+F  TKHGA  L  QL K GI A A H  +SQ  R + L +FK G I+ LV
Sbjct: 241 GKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV 300

Query: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMI 358
           AT +AARG+DIDQL  VVNY+LP   ++YVHRIGRTGRAE+ GEA+S V  D  K L  I
Sbjct: 301 ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDI 360

Query: 359 ESRLGHLIERRVVEGFEP 376
           E  L   I R  + G+EP
Sbjct: 361 ERLLKREIPRMEIAGYEP 378