Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dadantii 3937

 Score =  270 bits (690), Expect = 9e-77
 Identities = 144/359 (40%), Positives = 222/359 (61%), Gaps = 5/359 (1%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           SF+ LGLS  ++  ++++GY+KP+ IQ + IP +L GRD++  AQTG+GKTA+F LP+L 
Sbjct: 7   SFASLGLSAPILNALSEMGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLN 66

Query: 62  KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQRL 120
            ++       K  + L+L PTRELA+QVAE   ++ K   G+  +A++GG     Q + L
Sbjct: 67  NIKADL----KAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRAL 122

Query: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ 180
             G  ++V TPGRL+D   +  +    +  +VLDEAD ML MGFIE +  I+  +P+E Q
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQ 182

Query: 181 FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE 240
             LFSAT+   +R + +  + DP E+ I ++  ++ +ISQ   TV    K+  L   +  
Sbjct: 183 TALFSATMPEAIRRITRRFMNDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEA 242

Query: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
           + +D A+IF+ TK+   ++   LE+ G ++ A +   +QA+R Q LE  K G++  L+AT
Sbjct: 243 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 302

Query: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIE 359
            VAARG+D++++S VVNYD+P  ++ YVHRIGRTGRA   G A+ FV     + L  IE
Sbjct: 303 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE 361