Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  280 bits (716), Expect = 6e-80
 Identities = 148/370 (40%), Positives = 235/370 (63%), Gaps = 8/370 (2%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           +F     ++ L + +  +G+ KPT IQ +AIP IL+G+DLIA AQTGTGKTA+F+LPIL 
Sbjct: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64

Query: 62  KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDE---QAQKQ 118
           K+ +   +   +   LI+ PTRELA+Q+ ++++      G+ S+A++GG D    + QK+
Sbjct: 65  KIAE---KGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQKK 121

Query: 119 RLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSE 178
            L  G +++VATPGRL+ L     +  + +E +VLDEADRMLDMGF + I KII+ LP  
Sbjct: 122 ALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPKN 181

Query: 179 VQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLI 238
            Q +LFSAT+  K+R+ +K  V DPHEI+IA ++ ++  ++Q +       K +LL H++
Sbjct: 182 RQTVLFSATMPPKIRQFSKKIVTDPHEINIAISKTAE-GVTQRIYMAHDSQKESLLEHIL 240

Query: 239 NEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLV 298
            ++ ++  ++F  TK     +   L+K+    EAFHS  SQ  R  ++ +FK+  +K L+
Sbjct: 241 TQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKILI 299

Query: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMI 358
            T + +RGID++ +  V+NYD P   ++YVHR+GRT RA+  GEAI+FV++ +   L   
Sbjct: 300 GTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHKT 359

Query: 359 ESRLGHLIER 368
           ++ +G  I R
Sbjct: 360 QNLIGLEIPR 369