Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  268 bits (684), Expect = 4e-76
 Identities = 149/354 (42%), Positives = 218/354 (61%), Gaps = 7/354 (1%)

Query: 3   FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
           F+ LG+S  ++Q V  +GY +P+ IQ Q+IP++L+G D+I  AQTGTGKTASF +PI+++
Sbjct: 7   FADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDR 66

Query: 63  LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGK-DTGLKSLAVFGGVDEQAQKQRLI 121
           +        K+ +ALIL PTRELA+QV  ++ +  K   G+ S A++GG     Q + L 
Sbjct: 67  VDSSS----KQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLK 122

Query: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
            GV ++V TPGR+MD   +  +  + ++ +VLDEAD MLDMGF E I  ++  +P + Q 
Sbjct: 123 RGVQIVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQT 182

Query: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQ 241
           + FSAT+++ + +L +    +P  + I   + +  NISQ    V    K  L++ LIN  
Sbjct: 183 IFFSATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINIH 242

Query: 242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATG 301
           Q++  ++F  TK    ++   L  RGI AEA H   SQA R +++  F+ G    LVAT 
Sbjct: 243 QFNLGVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATD 302

Query: 302 VAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVS--KDNFK 353
           VAARGID+D +  V NYDLP   + YVHRIGRTGRA   G AISF++  KD F+
Sbjct: 303 VAARGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFR 356