Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  274 bits (701), Expect = 3e-78
 Identities = 149/383 (38%), Positives = 232/383 (60%), Gaps = 16/383 (4%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           SF    L+  L++ V + GY KPT IQ + IP+ L G+D++  AQTGTGKTA++VLP+L 
Sbjct: 7   SFENFKLNKQLLEAVKEAGYTKPTPIQEKTIPLALAGQDILGIAQTGTGKTAAYVLPLLM 66

Query: 62  KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
           K +  Q +     RALIL PTREL +Q+ + +   GK T L+   ++GGV    Q +++ 
Sbjct: 67  KTKYAQGEH---ARALILAPTRELVIQIEQAILTLGKYTDLRYACLYGGVGPTPQIEKIR 123

Query: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
            GVD+++ATPGR MD+Y +  ++   I+ +V+DEAD+M+DMGF+  I  I++ +P + Q 
Sbjct: 124 AGVDIIIATPGRFMDIYSKGELFVRNIKTMVMDEADKMMDMGFMPQIRSILEVIPVKRQN 183

Query: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKDTKSALLSHLINE 240
           +LFSAT S +V  ++   +  P  I IA    +   ++Q    V +  TK  LL HL+  
Sbjct: 184 MLFSATFSERVERISHEFLEFPERIEIALQATTADTVAQTKYFVPNLKTKITLLDHLLQN 243

Query: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAE--AFHSGRSQAIRAQLLEDFKSGKIKYLV 298
           ++ ++ ++F +++  A  +   LE+R  H E    H+ + Q  R   ++DFKSG ++ LV
Sbjct: 244 EEINRVIVFTKSRKNAEAVYQYLERRK-HGEIRVIHANKGQNTRINSVDDFKSGDVRILV 302

Query: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMI 358
           AT VAARG+DI  +S VVN+D+P   ++YVHR+GRTGRAE  G A +FV+          
Sbjct: 303 ATDVAARGLDISMVSHVVNFDVPLIYEDYVHRVGRTGRAEQEGAAFTFVNPAE------- 355

Query: 359 ESRLGHLIERRVVEGFEPKKPVP 381
           E   G + E  ++    P++P+P
Sbjct: 356 EYHFGRIEE--IIRMEVPEEPIP 376