Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  332 bits (852), Expect = 1e-95
 Identities = 184/425 (43%), Positives = 257/425 (60%), Gaps = 5/425 (1%)

Query: 16  QSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCD 75
           Q  + QH   + ++ A++R++A IEFD  G +L ANA FL AMGY  E++ GQ H++FC 
Sbjct: 14  QHTLAQH---ASLLDAIERSMAVIEFDLHGNVLRANANFLQAMGYRAEQIEGQSHRMFCT 70

Query: 76  PETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAH 135
           P    S EY Q W +L  GQ Q   F R+  DG S+W+EA+Y PVR+ AG V KV+K A 
Sbjct: 71  PAFARSAEYNQLWSNLRNGQYQSGTFERVAGDGQSVWLEASYNPVRDDAGHVIKVVKYAM 130

Query: 136 DVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMF 195
           DVT       +  A   ++ R+ A+I+FN DGTI  AN NFL+  GY L ++ G+HHR+F
Sbjct: 131 DVTPRLQAESEANAKLAAISRAMAVIEFNLDGTIITANANFLQRMGYTLAQVQGQHHRLF 190

Query: 196 CDDRFYKENP--NFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKF 253
           C           +FWR L +GE  SG F R  ++GQ +WLEA YNP+++  G + +VVKF
Sbjct: 191 CTKALANSPAYEDFWRRLNQGEMFSGQFERVDKNGQAVWLEANYNPVYDAGGRLCKVVKF 250

Query: 254 ASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALM 313
           ASDVT  V +  A   ++  A   S  T  +AE G E+I   A+    I   I G++ L+
Sbjct: 251 ASDVTAMVQQHTADAASAAQAYHISLNTRDIAEKGAEVIQQTASGMRDIAADIDGSSQLI 310

Query: 314 TDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTS 373
             L  +SQ+IT IV TI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+ TS
Sbjct: 311 AKLGERSQQITAIVNTIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTS 370

Query: 374 QATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQKTVS 433
            +T+EI +++      T Q+  +M+  + +  +   +  +  ++I QI+    +  + VS
Sbjct: 371 GSTAEISSMIAMIQDETRQAIHSMDGTRDRAAQGVDLANRAGTVILQIREGTSDAVQAVS 430

Query: 434 NIVDE 438
              +E
Sbjct: 431 AFANE 435