Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

 Score =  154 bits (389), Expect = 2e-42
 Identities = 96/242 (39%), Positives = 129/242 (53%), Gaps = 53/242 (21%)

Query: 149 AVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFCDD--RFYKENPN 206
           AV+ ++ RS A+I+F PDGTI  AN+ FL   GY L EIVG+HHR+FCD+          
Sbjct: 12  AVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQALSTAYAA 71

Query: 207 FWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVT-DQVLKAH 265
            W +LA+G+F +G + R  +HG+D+WL+ATYNP+FN  G V +++K A+D T  ++L+A 
Sbjct: 72  LWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPSKILRAE 131

Query: 266 ATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRITQ 325
                  +                            I E+I+G                 
Sbjct: 132 LKSTVDGLVD--------------------------IVETISG----------------- 148

Query: 326 IVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDNIVKR 385
                  IA QTNLLALNA IEAARAGE GRGFAVVA EV+ LA +T  AT     +V  
Sbjct: 149 -------IANQTNLLALNATIEAARAGEAGRGFAVVAAEVKKLAGDTRAATDRARAMVVA 201

Query: 386 NS 387
           +S
Sbjct: 202 SS 203



 Score =  113 bits (282), Expect = 6e-30
 Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 1/122 (0%)

Query: 22  HNHDSDIV-SALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVN 80
           H H  D V  A+ R+ A IEF P G IL AN LFL+ MGY   E++G+HH+IFCD     
Sbjct: 6   HPHSRDAVWDAICRSQAVIEFAPDGTILWANDLFLATMGYALGEIVGRHHRIFCDEGQAL 65

Query: 81  SLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKA 140
           S  YA  W  LAQG      + RL K G  IW++ATY PV N  G V +++K+A D T +
Sbjct: 66  STAYAALWDKLAQGDFDAGEYRRLDKHGRDIWLQATYNPVFNAEGRVERILKIATDTTPS 125

Query: 141 KI 142
           KI
Sbjct: 126 KI 127