Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

 Score =  330 bits (846), Expect = 5e-95
 Identities = 175/409 (42%), Positives = 258/409 (63%), Gaps = 5/409 (1%)

Query: 29  VSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCDPETVNSLEYAQFW 88
           ++A+ R++A IEF P G ILDAN  F  AMGY+ +E+ G+HH++FC+P+   S EY Q W
Sbjct: 27  LAAIGRSMAMIEFAPDGTILDANERFCQAMGYSADELRGKHHRLFCEPDYAKSAEYQQLW 86

Query: 89  KSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAHDVTKAKITADKQA 148
           + L QG+A    F R+ K G  +W+EA+YMPV +    V  VIKVA D+T+  +   +  
Sbjct: 87  RELGQGKAISGTFERIDKAGREVWLEASYMPVLDEHRQVTSVIKVASDITQRVVQEHESE 146

Query: 149 AVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGKHHRMFC--DDRFYKENPN 206
           ++  ++ RS A+I+F P G + +AN+NFL   GYRL+E+VG+HH +FC   +R   +   
Sbjct: 147 SLLKAISRSMAVIEFTPQGRVIKANQNFLDTMGYRLDEVVGRHHGLFCLAHERESAQYRE 206

Query: 207 FWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQVVKFASDVTDQVLKAHA 266
           FW  L RGE+ S  F R  + GQ ++LEA+YNPIF+  G + +VVKFASD+T QV     
Sbjct: 207 FWASLNRGEYHSHRFERVNKQGQTVFLEASYNPIFDSKGRLCKVVKFASDITHQVC---T 263

Query: 267 TKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGANALMTDLSSQSQRITQI 326
            + A+  A  +S +T   A  G E++  A  +   I++ +  A   +  ++ QS  I QI
Sbjct: 264 QQSAAHAAHASSVQTDACARKGTEVVQQAVQVIEQISQELNDAARSIDAVNRQSDVIGQI 323

Query: 327 VTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLASNTSQATSEIDNIVKRN 386
           V TI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR+LA+ TS+AT EI ++V++N
Sbjct: 324 VLTIRGIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAARTSKATLEIVDVVRQN 383

Query: 387 SQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQKTVSNI 435
             L+  +  +M+    +      +  +  ++I +IQ  + +V   +S I
Sbjct: 384 HDLSLLAVASMQSSLNRTGHGVALANEAGTVIMEIQQGSRHVVDAISQI 432



 Score =  110 bits (276), Expect = 7e-29
 Identities = 52/138 (37%), Positives = 83/138 (60%), Gaps = 1/138 (0%)

Query: 16  QSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHKIFCD 75
           Q  V++H  +S ++ A+ R++A IEF PQG+++ AN  FL  MGY  +EV+G+HH +FC 
Sbjct: 137 QRVVQEHESES-LLKAISRSMAVIEFTPQGRVIKANQNFLDTMGYRLDEVVGRHHGLFCL 195

Query: 76  PETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKVIKVAH 135
                S +Y +FW SL +G+     F R+ K G ++++EA+Y P+ +  G + KV+K A 
Sbjct: 196 AHERESAQYREFWASLNRGEYHSHRFERVNKQGQTVFLEASYNPIFDSKGRLCKVVKFAS 255

Query: 136 DVTKAKITADKQAAVFHS 153
           D+T    T    A   H+
Sbjct: 256 DITHQVCTQQSAAHAAHA 273