Pairwise Alignments

Query, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

 Score =  271 bits (693), Expect = 3e-77
 Identities = 165/424 (38%), Positives = 245/424 (57%), Gaps = 8/424 (1%)

Query: 16  QSEVEQHNHD----SDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHHK 71
           + E+ Q   D      + S+L   +  ++ DPQG+I   N  F S M Y  E+++G++ +
Sbjct: 15  KQEIRQLREDLMSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIE 74

Query: 72  IFCDPETVNSLEYAQFWKS-LAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKV 130
               P  V SL++ Q  KS +++G+     F  L+ +G   W+ +   PV+N  G +   
Sbjct: 75  DIV-PAHVKSLDFYQRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYF 133

Query: 131 IKVAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGK 190
              + D+T+   T+ +  ++  +L RS+A+I+F+ DG I  AN+ FL   GYRLE+I GK
Sbjct: 134 TLHSSDLTRTIETSREHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGK 193

Query: 191 HHRMFCDDRFYKEN--PNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVT 248
           HHRMFC+ +         FW  L RGE+ +  F R   HG+ +WLEA+YNPIF+   V+ 
Sbjct: 194 HHRMFCEPQEVNSAGYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLY 253

Query: 249 QVVKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAG 308
           +VVKFA+ +TDQV +  A  EA+ +A  TS  T   A    E++    T+  G+  S+  
Sbjct: 254 KVVKFATVITDQVNQELAVAEAADVAYNTSLGTDVSARKATEVVTQTVTVMRGLEASMQE 313

Query: 309 ANALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSL 368
           A   +  L +QS+ I  I+ TI+ IA QTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 314 AADGIQALDTQSRVIGSIIKTISDIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRQL 373

Query: 369 ASNTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENV 428
           AS TS AT EI  +V++N QL + +   ++  + +  +   +  +T S+I +IQ  A+ V
Sbjct: 374 ASRTSTATEEIARVVQQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRV 433

Query: 429 QKTV 432
              V
Sbjct: 434 VDVV 437